An integrated setup for in-vitro optogenetic experiments using AI to localize stimulation

Ilya Auslender; Yasaman Heydari; Clara Zaccaria; Asiye Malkoç; Beatrice Vignoli; Lorenzo Pavesi

doi:10.1117/12.2651569

14 March 2023 An integrated setup for in-vitro optogenetic experiments using AI to localize stimulation

Ilya Auslender, Yasaman Heydari, Clara Zaccaria, Asiye Malkoç, Beatrice Vignoli, Lorenzo Pavesi

Proceedings Volume 12366, Optogenetics and Optical Manipulation 2023; 1236609 (2023) https://doi.org/10.1117/12.2651569
Event: SPIE BiOS, 2023, San Francisco, California, United States

Conference Poster

Abstract

In this proceeding we discuss the recent work involving our developed optogenetic tool, where we use digital light processor (DLP) as a light-stimulation source of neuronal culture and microelectrode array (MEA) system as the sampling unit. In this work we aim at developing an integrated experimental platform which should assist in the study of the structure and the function of neuronal networks. In particular, the setup proposed in this work should serve as an optogenetic tool for in-vitro experiments, controlled by a feedback from electrophysiological signals from the network to address specific neuronal circuits. In this manuscript some of the recent results from experiments involving optical stimulation and electrophysiological recording of neuronal cultures are shown. Additionally, we have developed an AI-based model which is trained according the recorded electrophysiological signals and reproduces the functionality and the macro-structure of the culture under test. The description and some preliminary results of this model are also discussed in this proceeding.

Citation Download Citation

Ilya Auslender, Yasaman Heydari, Clara Zaccaria, Asiye Malkoç, Beatrice Vignoli, and Lorenzo Pavesi "An integrated setup for in-vitro optogenetic experiments using AI to localize stimulation", Proc. SPIE 12366, Optogenetics and Optical Manipulation 2023, 1236609 (14 March 2023); https://doi.org/10.1117/12.2651569

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